EnhancerDB
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  3. rs1982272[chr17:55453351]
Enhancers that have rs1982272[chr17:55453351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1982272[chr17:55453351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55448417 55457368 ZBTB33 GTRD no Lung (A549) 108273940
chr17 55448498 55457254 ZBTB33 GTRD no Lung (A549) 108273941
chr17 55453341 55453351 ALX3 JASPAR yes 54948250
chr17 55453341 55453351 EMX2 JASPAR yes 54948251
chr17 55453341 55453351 ESX1 JASPAR yes 54948252
chr17 55453341 55453351 GSX1 JASPAR yes 54948253
chr17 55453341 55453351 GSX2 JASPAR yes 54948254
chr17 55453341 55453351 HOXA2 JASPAR yes 54948255
chr17 55453341 55453351 HOXB2 JASPAR yes 54948256
chr17 55453341 55453351 HOXB3 JASPAR yes 54948257
chr17 55453341 55453351 LBX2 JASPAR yes 54948258
chr17 55453341 55453351 LHX2 JASPAR yes 54948259
chr17 55453341 55453351 LHX6 JASPAR yes 54948260
chr17 55453341 55453351 MEOX1 JASPAR yes 54948261
chr17 55453341 55453351 MEOX2 JASPAR yes 54948262
chr17 55453341 55453351 MIXL1 JASPAR yes 54948263
chr17 55453341 55453351 NOTO JASPAR yes 54948264
chr17 55453341 55453355 RORA JASPAR yes 54948265
chr17 55453342 55453352 POU6F2 JASPAR yes 54948286
Genes associated with rs1982272[chr17:55453351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More