EnhancerDB
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  3. rs198538[chr17:48642693]
Enhancers that have rs198538[chr17:48642693]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48639545 48645615 enh17221
Ovary Muscle (A673) Placenta Uterus Stomach
chr17 48642446 48642840 vista25116
VISTA
Transcript factors that have rs198538[chr17:48642693]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48641315 48642862 TCF7L2 GTRD no Colon (HCT116) 108270842
chr17 48641389 48643201 TCF7L2 GTRD no Colon (HCT116) 108270843
chr17 48641419 48642840 ZNF143 GTRD no Epithelial (MCF-7) 108270844
chr17 48641450 48643104 TCF7L2 GTRD no Colon (HCT116) 108270845
chr17 48641458 48643089 ZBTB33 GTRD no Lung (A549) 108270846
chr17 48641519 48643046 TCF7L2 GTRD no Colon (HCT116) 108270847
chr17 48641543 48643762 ZBTB33 GTRD no Lung (A549) 108270848
chr17 48641557 48643168 TCF7L2 GTRD no Colon (HCT116) 108270849
chr17 48641654 48643028 ZNF143 GTRD no Epithelial (MCF-7) 108270850
chr17 48641791 48647241 ZBTB33 GTRD no Lung (A549) 108270851
chr17 48641877 48643004 ZNF143 GTRD no Epithelial (MCF-7) 108270852
chr17 48641956 48642968 ZBTB33 GTRD no Lung (A549) 108270853
chr17 48641967 48648295 ZBTB33 GTRD no Lung (A549) 108270854
chr17 48641967 48648295 ZBTB33 GTRD no Lung (A549) 108270855
chr17 48642076 48643285 ZBTB33 GTRD no Lung (A549) 108270856
chr17 48642176 48648397 ZBTB33 GTRD no Lung (A549) 108270857
chr17 48642176 48648397 ZBTB33 GTRD no Lung (A549) 108270858
chr17 48642179 48643032 ZBTB33 GTRD no Lung (A549) 108270859
chr17 48642192 48643015 ZNF274 GTRD no Bone Marrow (K562) 108270860
chr17 48642193 48642994 ZBTB33 GTRD no Lung (A549) 108270861
chr17 48642197 48643015 TCF7L2 GTRD no Colon (HCT116) 108270862
chr17 48642212 48642992 ZBTB33 GTRD no Lung (A549) 108270863
chr17 48642236 48648395 ZBTB33 GTRD no Lung (A549) 108270864
chr17 48642236 48648395 ZBTB33 GTRD no Lung (A549) 108270865
chr17 48642243 48643032 ZBTB33 GTRD no Lung (A549) 108270866
chr17 48642263 48643580 ZBTB33 GTRD no Lung (A549) 108270867
chr17 48642265 48642951 ZBTB33 GTRD no Lung (A549) 108270868
chr17 48642265 48644028 ZBTB33 GTRD no Lung (A549) 108270869
chr17 48642268 48642928 SOX2 GTRD no Neural Stem Cells (H9) 108270870
chr17 48642292 48643005 ZBTB33 GTRD no Lung (A549) 108270871
chr17 48642304 48643981 ZBTB33 GTRD no Lung (A549) 108270872
chr17 48642307 48643077 SOX2 GTRD no Neural Stem Cells (H9) 108270873
chr17 48642309 48643353 ZBTB33 GTRD no Lung (A549) 108270874
chr17 48642326 48644173 ZBTB33 GTRD no Lung (A549) 108270876
chr17 48642340 48642909 ZBTB33 GTRD no Lung (A549) 108270877
chr17 48642355 48642745 ZNF274 GTRD no Liver (HepG2) 108270878
chr17 48642394 48642782 ZBTB33 GTRD no Lung (A549) 108270880
chr17 48642426 48642807 SOX2 GTRD no Neural Stem Cells (H9) 108270881
chr17 48642431 48642950 SOX2 GTRD no Neural Stem Cells (H9) 108270882
chr17 48642459 48642945 ZBTB33 GTRD no Lung (A549) 108270883
chr17 48642477 48642715 SOX2 GTRD no Neural Stem Cells (H9) 108270885
chr17 48642560 48642804 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108270886
chr17 48642679 48642693 PLAG1 JASPAR yes 21254506
chr17 48642679 48642693 PLAG1 JASPAR yes 54708006
chr17 48642689 48642708 PAX5 JASPAR yes 21254507
chr17 48642689 48642708 PAX5 JASPAR yes 54708007
chr17 48642692 48642709 PAX1 JASPAR yes 21254508
chr17 48642692 48642709 PAX1 JASPAR yes 54708008
Genes associated with rs198538[chr17:48642693], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More