EnhancerDB
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  3. rs198740[chr11:61372896]
Enhancers that have rs198740[chr11:61372896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61360185 61399298 enh13959
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs198740[chr11:61372896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61372513 61373009 ZNF143 GTRD no Epithelial (MCF-7) 21486405
chr11 61372773 61372962 ZBTB33 GTRD no Brain (SK-N-SH) 21486406
chr11 61372882 61372898 ZNF143 JASPAR yes 39150753
chr11 61372890 61372899 HIC2 JASPAR yes 39150754
Genes associated with rs198740[chr11:61372896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 60739115 60787849 + CD6 ENSG00000013725.10 60739115 585047 Ovary 0.359128 10923