EnhancerDB
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  3. rs1991942[chr2:232485833]
Enhancers that have rs1991942[chr2:232485833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr2 232485741 232486244 vista35163
VISTA
Transcript factors that have rs1991942[chr2:232485833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232485702 232485963 TFAP2C UCSC Txn Factor no Conserved 108435703
chr2 232485819 232485834 TFAP2A JASPAR yes 22229385
chr2 232485819 232485834 TFAP2C JASPAR yes 22229386
chr2 232485819 232485834 TFAP2A JASPAR yes 81727169
chr2 232485819 232485834 TFAP2C JASPAR yes 81727170
chr2 232485821 232485833 INSM1 JASPAR yes 22229387
chr2 232485821 232485833 INSM1 JASPAR yes 81727171
chr2 232485821 232485836 TFAP2A JASPAR yes 22229388
chr2 232485821 232485836 TFAP2A JASPAR yes 81727172
chr2 232485822 232485833 TFAP2A JASPAR yes 22229389
chr2 232485822 232485833 TFAP2B JASPAR yes 22229390
chr2 232485822 232485833 TFAP2C JASPAR yes 22229391
chr2 232485822 232485833 TFAP2A JASPAR yes 81727173
chr2 232485822 232485833 TFAP2B JASPAR yes 81727174
chr2 232485822 232485833 TFAP2C JASPAR yes 81727175
chr2 232485831 232485835 YY1 TRANSFAC yes 22229393
chr2 232485831 232485835 YY1 TRANSFAC yes 81727177
Genes associated with rs1991942[chr2:232485833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More