EnhancerDB
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  3. rs1994876[chr3:8549665]
Enhancers that have rs1994876[chr3:8549665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs1994876[chr3:8549665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8549650 8549665 RFX5 JASPAR yes 298375
chr3 8549659 8549674 SCRT1 JASPAR yes 298376
chr3 8549660 8549670 ID4 JASPAR yes 298377
chr3 8549660 8549670 TCF3 JASPAR yes 298378
chr3 8549660 8549670 TCF4 JASPAR yes 298379
chr3 8549661 8549670 SNAI2 JASPAR yes 298380
chr3 8549662 8549667 USF2 TRANSFAC yes 298381
Genes associated with rs1994876[chr3:8549665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More