EnhancerDB
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  3. rs199508412[chr1:112061541]
Enhancers that have rs199508412[chr1:112061541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112044245 112062755 enh565
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs199508412[chr1:112061541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112061527 112061543 SOX4 JASPAR yes 31525644
chr1 112061527 112061548 IRF1 JASPAR yes 31525645
chr1 112061528 112061541 POU2F2 JASPAR yes 31525647
chr1 112061529 112061544 PRDM1 JASPAR yes 31525650
chr1 112061529 112061544 STAT2 JASPAR yes 31525651
chr1 112061530 112061544 STAT1 JASPAR yes 31525653
chr1 112061531 112061543 IRF1 JASPAR yes 31525654
chr1 112061531 112061545 IRF7 JASPAR yes 31525655
chr1 112061531 112061546 IRF9 JASPAR yes 31525656
chr1 112061537 112061557 RREB1 JASPAR yes 31525658
chr1 112061540 112061546 TCF4 TRANSFAC yes 31525659
chr1 112061540 112061552 FOXI1 JASPAR yes 31525660
chr1 112061540 112061555 FOXP1 JASPAR yes 31525661
chr1 112061540 112061560 RREB1 JASPAR yes 31525662
chr1 112061541 112061561 RREB1 JASPAR yes 31525663
Genes associated with rs199508412[chr1:112061541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More