EnhancerDB
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  3. rs199517690[chr12:96828606]
Enhancers that have rs199517690[chr12:96828606]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199517690[chr12:96828606]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96828014 96828795 ZNF274 GTRD no Cervix (HeLa-S3) 21567741
chr12 96828014 96828795 ZNF274 GTRD no Cervix (HeLa-S3) 108053336
chr12 96828042 96828783 ZBTB33 GTRD no Lung (A549) 108053340
chr12 96828045 96828846 ZBTB33 GTRD no Lung (A549) 108053341
chr12 96828055 96828705 ZBTB33 GTRD no Lung (A549) 108053343
chr12 96828060 96828677 ZNF274 GTRD no Liver (HepG2) 108053344
chr12 96828148 96828790 ZNF143 GTRD no Epithelial (MCF-7) 21567742
chr12 96828148 96828790 ZNF143 GTRD no Epithelial (MCF-7) 108053353
chr12 96828157 96828622 ZNF143 GTRD no Epithelial (MCF-7) 21567743
chr12 96828157 96828622 ZNF143 GTRD no Epithelial (MCF-7) 108053354
chr12 96828172 96828813 ZNF143 GTRD no Epithelial (MCF-7) 21567744
chr12 96828172 96828813 ZNF143 GTRD no Epithelial (MCF-7) 108053355
chr12 96828189 96828665 ZNF274 GTRD no Liver (HepG2) 108053357
chr12 96828201 96828715 ZNF274 GTRD no Bone Marrow (K562) 108053360
chr12 96828205 96828737 ZBTB33 GTRD no Lung (A549) 108053363
chr12 96828241 96828633 ZNF143 GTRD no Epithelial (MCF-7) 21567746
chr12 96828241 96828633 ZNF143 GTRD no Epithelial (MCF-7) 108053366
chr12 96828268 96828670 ZNF143 GTRD no Epithelial (MCF-7) 21567747
Genes associated with rs199517690[chr12:96828606], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More