EnhancerDB
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  3. rs199538286[chr1:209574139]
Enhancers that have rs199538286[chr1:209574139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs199538286[chr1:209574139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209574136 209574148 E2F8 JASPAR yes 34971616
chr1 209574138 209574148 ZNF740 JASPAR yes 34971617
chr1 209574138 209574152 GLIS2 JASPAR yes 34971618
chr1 209574138 209574152 GLIS3 JASPAR yes 34971619
Genes associated with rs199538286[chr1:209574139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More