EnhancerDB
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  3. rs199626480[chr17:43442860]
Enhancers that have rs199626480[chr17:43442860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43440002 43455235 enh17189
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs199626480[chr17:43442860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43442508 43443234 ZBTB33 GTRD no Brain (SK-N-SH) 21765502
chr17 43442537 43443175 ZBTB33 GTRD no Brain (SK-N-SH) 21765503
chr17 43442596 43443238 ZBTB33 GTRD no Brain (SK-N-SH) 21765504
chr17 43442663 43442963 TCF7L2 GTRD no Colon (HCT116) 21765505
chr17 43442732 43443149 ZNF274 GTRD no Cervix (HeLa-S3) 21765506
chr17 43442735 43443057 ZBTB33 GTRD no Brain (SK-N-SH) 21765507
chr17 43442772 43443069 ZNF274 GTRD no Cervix (HeLa-S3) 21765508
chr17 43442843 43442863 RREB1 JASPAR yes 54448734
chr17 43442846 43442866 RREB1 JASPAR yes 54448735
chr17 43442848 43442868 RREB1 JASPAR yes 54448736
chr17 43442849 43442864 FOXP1 JASPAR yes 54448737
chr17 43442850 43442871 IRF1 JASPAR yes 54448738
chr17 43442851 43442871 RREB1 JASPAR yes 54448739
chr17 43442854 43442869 FOXP1 JASPAR yes 54448740
chr17 43442855 43442876 IRF1 JASPAR yes 54448741
chr17 43442856 43442871 FOXP1 JASPAR yes 54448742
chr17 43442856 43442876 RREB1 JASPAR yes 54448743
chr17 43442856 43442877 IRF1 JASPAR yes 54448744
chr17 43442857 43442872 FOXP1 JASPAR yes 54448745
chr17 43442857 43442878 IRF1 JASPAR yes 54448746
chr17 43442858 43442873 FOXP1 JASPAR yes 54448747
chr17 43442859 43442874 FOXP1 JASPAR yes 54448748
chr17 43442860 43442875 FOXP1 JASPAR yes 54448749
chr17 43442860 43442881 IRF1 JASPAR yes 54448750
Genes associated with rs199626480[chr17:43442860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More