EnhancerDB
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  3. rs199642289[chr6:12342311]
Enhancers that have rs199642289[chr6:12342311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs199642289[chr6:12342311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12342292 12342313 IRF1 JASPAR yes 99963069
chr6 12342293 12342314 IRF1 JASPAR yes 99963071
chr6 12342298 12342313 FOXP1 JASPAR yes 99963074
chr6 12342299 12342314 FOXP1 JASPAR yes 99963075
chr6 12342303 12342317 SPIC JASPAR yes 99963076
chr6 12342306 12342311 ETS2 TRANSFAC yes 99963077
Genes associated with rs199642289[chr6:12342311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More