EnhancerDB
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  3. rs199737479[chr17:40401410]
Enhancers that have rs199737479[chr17:40401410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs199737479[chr17:40401410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40398586 40401546 ZBTB33 GTRD no Lung (A549) 108259994
chr17 40401408 40401429 IRF1 JASPAR yes 54289375
chr17 40401409 40401430 IRF1 JASPAR yes 54289376
chr17 40401410 40401422 FOXC2 JASPAR yes 54289377
Genes associated with rs199737479[chr17:40401410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More