EnhancerDB
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  3. rs199761528[chr1:41421583]
Enhancers that have rs199761528[chr1:41421583]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41400705 41424275 enh11780
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Stomach
Transcript factors that have rs199761528[chr1:41421583]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41421568 41421589 IRF1 JASPAR yes 28359671
chr1 41421570 41421585 STAT2 JASPAR yes 28359672
chr1 41421571 41421585 SPIC JASPAR yes 28359673
chr1 41421571 41421585 STAT1 JASPAR yes 28359674
chr1 41421572 41421584 IRF1 JASPAR yes 28359675
chr1 41421572 41421586 IRF7 JASPAR yes 28359676
chr1 41421572 41421586 IRF8 JASPAR yes 28359677
chr1 41421572 41421587 IRF9 JASPAR yes 28359678
chr1 41421574 41421594 RREB1 JASPAR yes 28359679
chr1 41421577 41421597 RREB1 JASPAR yes 28359680
chr1 41421581 41421587 TCF4 TRANSFAC yes 28359681
Genes associated with rs199761528[chr1:41421583], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 41827594 41849262 + FOXO6 ENSG00000204060.4 41827594 406011 Thyroid 0.212681 575