EnhancerDB
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  3. rs199800595[chr1:155188229]
Enhancers that have rs199800595[chr1:155188229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs199800595[chr1:155188229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155187998 155188884 ZNF143 GTRD no Epithelial (MCF-7) 21341344
chr1 155188078 155188600 ZNF143 GTRD no Epithelial (MCF-7) 21341345
chr1 155188101 155188900 ZNF143 GTRD no Epithelial (MCF-7) 21341346
chr1 155188178 155188875 ZNF143 GTRD no Epithelial (MCF-7) 21341347
chr1 155188195 155188904 ZNF143 GTRD no Epithelial (MCF-7) 21341348
chr1 155188224 155188237 SMAD2 JASPAR yes 32335597
Genes associated with rs199800595[chr1:155188229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More