EnhancerDB
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  3. rs199837973[chr1:230204351]
Enhancers that have rs199837973[chr1:230204351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 230203814 230204638 vista5485
VISTA
Transcript factors that have rs199837973[chr1:230204351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230203761 230204377 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878284
chr1 230203873 230204353 TBP UCSC Txn Factor no Conserved 107878289
chr1 230203977 230204353 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391235
chr1 230203977 230204353 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878299
chr1 230204022 230204386 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878305
chr1 230204069 230204439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878307
Genes associated with rs199837973[chr1:230204351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More