EnhancerDB
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  3. vista5485[chr1:230203814-230204638]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5485[chr1:230203814-230204638]
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Tissue distribution of vista5485
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Transcription factor that possibly regulate vista5485[chr1:230203814-230204638]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230203738 230204285 ZNF263 UCSC Txn Factor no Conserved 107878282
chr1 230203873 230204353 TBP UCSC Txn Factor no Conserved 107878289
chr1 230203919 230204217 UBTF UCSC Txn Factor no Conserved 107878292
chr1 230203822 230203831 TFAP2A JASPAR yes 36017823
chr1 230203822 230203831 TFAP2A JASPAR yes 118477215
chr1 230203830 230203841 E2F4 JASPAR yes 36017824
chr1 230203830 230203841 E2F6 JASPAR yes 36017825
chr1 230203830 230203841 E2F4 JASPAR yes 118477216
chr1 230203830 230203841 E2F6 JASPAR yes 118477217
chr1 230203831 230203842 E2F1 JASPAR yes 36017826
chr1 230203831 230203842 E2F1 JASPAR yes 118477218
chr1 230203832 230203847 ZBTB33 JASPAR yes 36017827
chr1 230203832 230203847 ZBTB33 JASPAR yes 118477219
chr1 230203841 230203851 ELK1 JASPAR yes 36017828
chr1 230203841 230203851 ELK1 JASPAR yes 118477220
chr1 230203858 230203879 IRF1 JASPAR yes 36017829
chr1 230203858 230203879 IRF1 JASPAR yes 118477221
chr1 230203860 230203875 STAT2 JASPAR yes 36017830
chr1 230203860 230203875 STAT2 JASPAR yes 118477222
chr1 230203861 230203875 STAT1 JASPAR yes 36017831
chr1 230203861 230203875 STAT1 JASPAR yes 118477223
chr1 230203862 230203877 IRF9 JASPAR yes 36017832
chr1 230203862 230203877 IRF9 JASPAR yes 118477224
chr1 230203867 230203871 YY1 TRANSFAC yes 36017833
chr1 230203867 230203871 YY1 TRANSFAC yes 118477225
chr1 230203868 230203878 NFATC3 JASPAR yes 36017834
chr1 230203868 230203878 NFATC3 JASPAR yes 118477226
chr1 230203869 230203876 NFATC2 JASPAR yes 36017835
chr1 230203869 230203876 NFATC2 JASPAR yes 118477227
chr1 230203876 230203882 MZF1 JASPAR yes 36017836
chr1 230203876 230203882 MZF1 JASPAR yes 118477228
chr1 230203884 230203899 TFAP2C JASPAR yes 36017837
chr1 230203884 230203899 TFAP2C JASPAR yes 118477229
chr1 230203893 230203906 NFKB2 JASPAR yes 36017838
chr1 230203893 230203906 NFKB2 JASPAR yes 118477230
chr1 230203895 230203905 NFKB1 JASPAR yes 36017839
chr1 230203895 230203905 NFKB1 JASPAR yes 118477231
chr1 230203915 230203930 FOXP1 JASPAR yes 36017840
chr1 230203915 230203930 FOXP1 JASPAR yes 118477232
chr1 230203924 230203927 MYB TRANSFAC yes 36017841
chr1 230203924 230203927 MYB TRANSFAC yes 118477233
chr1 230203929 230203940 EBF1 JASPAR yes 36017842
chr1 230203929 230203940 EBF1 JASPAR yes 118477234
chr1 230203936 230203941 SP1 TRANSFAC yes 36017843
chr1 230203936 230203941 SP1 TRANSFAC yes 118477235
chr1 230203936 230203956 ESR1 JASPAR yes 36017844
chr1 230203936 230203956 ESR1 JASPAR yes 118477236
chr1 230203956 230203961 TFAP2A TRANSFAC yes 36017845
chr1 230203956 230203961 TFAP2A TRANSFAC yes 118477237
chr1 230203956 230203962 MZF1 JASPAR yes 36017846
chr1 230203956 230203962 MZF1 JASPAR yes 118477238
chr1 230203984 230203996 HINFP JASPAR yes 36017847
chr1 230203984 230203996 HINFP JASPAR yes 118477239
chr1 230204017 230204026 TFAP2A JASPAR yes 36017848
chr1 230204017 230204026 TFAP2A JASPAR yes 118477240
chr1 230204019 230204028 HIC2 JASPAR yes 36017849
chr1 230204019 230204028 HIC2 JASPAR yes 118477241
chr1 230204022 230204026 LFA1 TRANSFAC yes 36017850
chr1 230204022 230204026 LFA1 TRANSFAC yes 118477242
chr1 230204027 230204048 REST JASPAR yes 36017851
chr1 230204027 230204048 REST JASPAR yes 118477243
chr1 230204048 230204069 REST JASPAR yes 36017852
chr1 230204048 230204069 REST JASPAR yes 118477244
chr1 230204049 230204068 REST JASPAR yes 36017853
chr1 230204049 230204068 REST JASPAR yes 118477245
chr1 230204068 230204072 H4TF2 TRANSFAC yes 36017854
chr1 230204068 230204072 H4TF2 TRANSFAC yes 118477246
chr1 230204111 230204129 TP53 JASPAR yes 36017855
chr1 230204111 230204129 TP53 JASPAR yes 118477247
chr1 230204125 230204138 TFAP2A JASPAR yes 36017856
chr1 230204125 230204138 TFAP2B JASPAR yes 36017857
chr1 230204125 230204138 TFAP2C JASPAR yes 36017858
chr1 230204125 230204138 TFAP2A JASPAR yes 118477248
chr1 230204125 230204138 TFAP2B JASPAR yes 118477249
chr1 230204125 230204138 TFAP2C JASPAR yes 118477250
chr1 230204178 230204186 GATA5 JASPAR yes 36017859
chr1 230204178 230204186 GATA5 JASPAR yes 118477251
chr1 230204186 230204192 ETS1 JASPAR yes 36017860
chr1 230204186 230204192 ETS1 JASPAR yes 118477252
chr1 230204191 230204206 STAT1 JASPAR yes 36017861
chr1 230204191 230204206 STAT1 JASPAR yes 118477253
chr1 230204193 230204204 STAT1 JASPAR yes 36017862
chr1 230204193 230204204 STAT1 JASPAR yes 118477254
chr1 230204200 230204203 MYB TRANSFAC yes 36017863
chr1 230204200 230204203 MYB TRANSFAC yes 118477255
chr1 230204218 230204222 YY1 TRANSFAC yes 36017864
chr1 230204218 230204222 YY1 TRANSFAC yes 118477256
chr1 230204227 230204236 RUNX2 JASPAR yes 36017865
chr1 230204227 230204236 RUNX2 JASPAR yes 118477257
chr1 230204227 230204237 RUNX3 JASPAR yes 36017866
chr1 230204227 230204237 RUNX3 JASPAR yes 118477258
chr1 230204260 230204276 ZNF143 JASPAR yes 36017867
chr1 230204260 230204276 ZNF143 JASPAR yes 118477259
chr1 230204264 230204284 RREB1 JASPAR yes 36017868
chr1 230204264 230204284 RREB1 JASPAR yes 118477260
chr1 230204299 230204304 GATA2 JASPAR yes 36017869
chr1 230204299 230204304 GATA2 JASPAR yes 118477261
chr1 230204324 230204327 MYB TRANSFAC yes 36017870
chr1 230204324 230204327 MYB TRANSFAC yes 118477262
chr1 230204404 230204410 TCF4 TRANSFAC yes 36017871
chr1 230204404 230204410 TCF4 TRANSFAC yes 118477263
chr1 230204454 230204466 SRF JASPAR yes 36017872
chr1 230204454 230204466 SRF JASPAR yes 118477264
chr1 230204456 230204467 RUNX1 JASPAR yes 36017873
chr1 230204456 230204467 RUNX1 JASPAR yes 118477265
chr1 230204457 230204467 RUNX3 JASPAR yes 36017874
chr1 230204457 230204467 RUNX3 JASPAR yes 118477266
chr1 230204462 230204477 STAT1 JASPAR yes 36017875
chr1 230204462 230204477 STAT1 JASPAR yes 118477267
chr1 230204464 230204475 STAT1 JASPAR yes 36017876
chr1 230204464 230204475 STAT3 JASPAR yes 36017877
chr1 230204464 230204475 STAT1 JASPAR yes 118477268
chr1 230204464 230204475 STAT3 JASPAR yes 118477269
chr1 230204473 230204487 XBP1 JASPAR yes 36017878
chr1 230204473 230204487 XBP1 JASPAR yes 118477270
chr1 230204479 230204485 ZNF354C JASPAR yes 36017879
chr1 230204479 230204485 ZNF354C JASPAR yes 118477271
chr1 230204488 230204496 GATA3 JASPAR yes 36017880
chr1 230204488 230204496 GATA3 JASPAR yes 118477272
chr1 230204500 230204504 LFA1 TRANSFAC yes 36017881
chr1 230204500 230204504 LFA1 TRANSFAC yes 118477273
chr1 230204521 230204531 CLOCK JASPAR yes 36017882
chr1 230204521 230204531 MAX JASPAR yes 36017883
chr1 230204521 230204531 MNT JASPAR yes 36017884
chr1 230204521 230204531 CLOCK JASPAR yes 118477274
chr1 230204521 230204531 MAX JASPAR yes 118477275
chr1 230204521 230204531 MNT JASPAR yes 118477276
chr1 230204522 230204529 USF1 JASPAR yes 36017885
chr1 230204522 230204529 USF1 JASPAR yes 118477277
chr1 230204523 230204528 MYC TRANSFAC yes 36017886
chr1 230204523 230204528 USF1 TRANSFAC yes 36017887
chr1 230204523 230204528 USF2 TRANSFAC yes 36017888
chr1 230204523 230204528 MYC TRANSFAC yes 118477278
chr1 230204523 230204528 USF1 TRANSFAC yes 118477279
chr1 230204523 230204528 USF2 TRANSFAC yes 118477280
chr1 230204523 230204544 MAFG JASPAR yes 36017889
chr1 230204523 230204544 MAFG JASPAR yes 118477281
chr1 230204546 230204556 SREBF2 JASPAR yes 36017890
chr1 230204546 230204556 SREBF2 JASPAR yes 118477282
chr1 230204580 230204586 TBP TRANSFAC yes 36017891
chr1 230204580 230204586 TBP TRANSFAC yes 118477283
SNP sites on vista5485[chr1:230203814-230204638]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230203848 rs570535995 G T
ELK1 ZNF263
1014326
chr1 230203940 rs12041601 G A
EBF1 ESR1 SP1 TBP UBTF ZNF263
1014327
chr1 230203951 rs3124555 T C
ESR1 TBP UBTF ZNF263
1014328
chr1 230204351 rs199837973 GA G
TBP
1014329
chr1 230204410 rs543330218 C T
TCF4
1014330
Genes possibly regulated by vista5485[chr1:230203814-230204638]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230193536 230417870 + GALNT2 ENSG00000143641.8 230193536 0.77 0.99 1937 89722
Expression level of Genes
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miRNAs possibly regulated by vista5485[chr1:230203814-230204638]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results