EnhancerDB
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  3. rs199849891[chr1:52115552]
Enhancers that have rs199849891[chr1:52115552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs199849891[chr1:52115552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52115536 52115557 IRF1 JASPAR yes 28859611
chr1 52115538 52115553 FOXP1 JASPAR yes 28859612
chr1 52115538 52115559 IRF1 JASPAR yes 28859613
chr1 52115542 52115556 IRF7 JASPAR yes 28859614
chr1 52115543 52115558 FOXP1 JASPAR yes 28859615
chr1 52115550 52115556 TCF4 TRANSFAC yes 28859616
Genes associated with rs199849891[chr1:52115552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More