EnhancerDB
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  3. rs199857598[chr16:14489680]
Enhancers that have rs199857598[chr16:14489680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14436207 14505799 enh3905
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs199857598[chr16:14489680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14489102 14490051 ZNF274 GTRD no Cervix (HeLa-S3) 21693141
chr16 14489176 14490051 ZNF274 GTRD no Blood (GM12878) 21693142
chr16 14489215 14490090 ZNF274 GTRD no Liver (HepG2) 21693143
chr16 14489237 14489993 ZNF274 GTRD no Blood (GM12878) 21693144
chr16 14489257 14490218 ZNF143 GTRD no Epithelial (MCF-7) 21693145
chr16 14489336 14489967 ZNF143 GTRD no Epithelial (MCF-7) 21693146
chr16 14489338 14489896 ZNF274 GTRD no Liver (HepG2) 21693147
chr16 14489350 14489746 ZNF143 GTRD no Epithelial (MCF-7) 21693148
chr16 14489356 14489776 ZNF143 GTRD no Epithelial (MCF-7) 21693149
chr16 14489362 14489841 ZNF274 GTRD no Liver (HepG2) 21693150
chr16 14489362 14489952 ZNF143 GTRD no Epithelial (MCF-7) 21693151
chr16 14489432 14489761 ZNF274 GTRD no Cervix (HeLa-S3) 21693152
chr16 14489436 14489995 ZNF274 GTRD no Liver (HepG2) 21693153
chr16 14489452 14489703 ZNF274 GTRD no Liver (HepG2) 21693154
chr16 14489455 14489857 ZNF274 GTRD no Cervix (HeLa-S3) 21693155
chr16 14489458 14489910 ZNF274 GTRD no Blood (GM12878) 21693156
chr16 14489468 14490144 ZNF274 GTRD no Liver (HepG2) 21693157
chr16 14489469 14489779 ZNF274 GTRD no Blood (GM12878) 21693158
chr16 14489471 14490139 ZNF143 GTRD no Epithelial (MCF-7) 21693159
chr16 14489523 14489772 ZNF143 GTRD no Epithelial (MCF-7) 21693160
chr16 14489677 14489692 FOXP1 JASPAR yes 9693724
chr16 14489679 14489694 FOXP1 JASPAR yes 9693725
Genes associated with rs199857598[chr16:14489680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More