EnhancerDB
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  3. rs199885683[chr5:172161487]
Enhancers that have rs199885683[chr5:172161487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199885683[chr5:172161487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172161477 172161488 E2F6 JASPAR yes 67819534
chr5 172161483 172161498 FOXA1 JASPAR yes 67819535
chr5 172161484 172161496 FOXI1 JASPAR yes 67819536
chr5 172161486 172161497 FOXB1 JASPAR yes 67819537
chr5 172161486 172161497 FOXC1 JASPAR yes 67819538
chr5 172161486 172161502 POU4F2 JASPAR yes 67819539
chr5 172161486 172161502 POU4F3 JASPAR yes 67819540
chr5 172161487 172161491 YY1 TRANSFAC yes 67819541
chr5 172161487 172161502 FOXA1 JASPAR yes 67819542
Genes associated with rs199885683[chr5:172161487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More