EnhancerDB
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  3. rs199889626[chr1:2178299]
Enhancers that have rs199889626[chr1:2178299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs199889626[chr1:2178299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2175546 2181036 ZNF274 GTRD no Bone Marrow (K562) 107801815
chr1 2178279 2178300 ZNF263 JASPAR yes 26226509
chr1 2178290 2178300 ZNF740 JASPAR yes 26226510
chr1 2178291 2178301 ZNF740 JASPAR yes 26226511
chr1 2178296 2178301 SP1 TRANSFAC yes 26226512
Genes associated with rs199889626[chr1:2178299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More