EnhancerDB
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  3. rs199893250[chr3:8563584]
Enhancers that have rs199893250[chr3:8563584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs199893250[chr3:8563584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8563565 8563585 RREB1 JASPAR yes 300155
chr3 8563566 8563587 IRF1 JASPAR yes 300156
chr3 8563570 8563585 IRF9 JASPAR yes 300160
chr3 8563572 8563592 RREB1 JASPAR yes 300162
chr3 8563572 8563593 IRF1 JASPAR yes 300163
chr3 8563574 8563589 STAT2 JASPAR yes 300164
chr3 8563576 8563591 IRF9 JASPAR yes 300165
chr3 8563577 8563589 IRF1 JASPAR yes 300166
chr3 8563579 8563585 TCF4 TRANSFAC yes 300167
chr3 8563579 8563594 FOXP1 JASPAR yes 300168
chr3 8563580 8563591 FOXP2 JASPAR yes 300169
chr3 8563580 8563592 FOXC2 JASPAR yes 300170
Genes associated with rs199893250[chr3:8563584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More