EnhancerDB
  1. Home
  2. SNP
  3. rs199895997[chr1:52023677]
Enhancers that have rs199895997[chr1:52023677]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs199895997[chr1:52023677]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52023665 52023678 DUXA JASPAR yes 28850352
chr1 52023666 52023677 DUX4 JASPAR yes 28850353
chr1 52023666 52023677 PHOX2A JASPAR yes 28850354
chr1 52023666 52023677 PROP1 JASPAR yes 28850355
chr1 52023676 52023682 TBP TRANSFAC yes 28850356
Genes associated with rs199895997[chr1:52023677], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More