EnhancerDB
  1. Home
  2. SNP
  3. rs199910827[chr19:2577698]
Enhancers that have rs199910827[chr19:2577698]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs199910827[chr19:2577698]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2576513 2580163 ZNF274 GTRD no Cervix (HeLa-S3) 21837210
chr19 2576513 2580163 ZNF274 GTRD no Cervix (HeLa-S3) 108362532
chr19 2576725 2579926 ZNF274 GTRD no Cervix (HeLa-S3) 21837211
chr19 2576725 2579926 ZNF274 GTRD no Cervix (HeLa-S3) 108362533
chr19 2577695 2577710 FOXP1 JASPAR yes 112077545
chr19 2577696 2577711 FOXP1 JASPAR yes 112077546
chr19 2577697 2577712 FOXP1 JASPAR yes 112077547
chr19 2577697 2577718 IRF1 JASPAR yes 112077548
chr19 2577698 2577713 FOXP1 JASPAR yes 112077549
chr19 2577698 2577719 IRF1 JASPAR yes 112077550
Genes associated with rs199910827[chr19:2577698], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More