EnhancerDB
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  3. rs199920546[chr6:13409597]
Enhancers that have rs199920546[chr6:13409597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199920546[chr6:13409597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13409583 13409604 ZNF263 JASPAR yes 100027228
chr6 13409586 13409607 ZNF263 JASPAR yes 100027229
chr6 13409587 13409608 IRF1 JASPAR yes 100027230
chr6 13409591 13409605 SPIC JASPAR yes 100027231
chr6 13409595 13409602 SPIB JASPAR yes 100027232
chr6 13409595 13409616 ZNF263 JASPAR yes 100027233
chr6 13409596 13409604 EHF JASPAR yes 100027234
chr6 13409596 13409617 ZNF263 JASPAR yes 100027235
Genes associated with rs199920546[chr6:13409597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More