EnhancerDB
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  3. rs199949948[chr6:139459619]
Enhancers that have rs199949948[chr6:139459619]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 139453205 139487395 enh9385
Skin (Keratinocyte) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs199949948[chr6:139459619]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 139459603 139459619 POU4F2 JASPAR yes 105767547
chr6 139459603 139459619 POU4F3 JASPAR yes 105767548
chr6 139459609 139459619 HOXC10 JASPAR yes 105767549
chr6 139459610 139459620 EMX1 JASPAR yes 105767550
chr6 139459610 139459620 HOXB3 JASPAR yes 105767551
chr6 139459610 139459620 MEOX2 JASPAR yes 105767552
chr6 139459611 139459619 NKX6-1 JASPAR yes 105767553
Genes associated with rs199949948[chr6:139459619], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More