EnhancerDB
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  3. rs200011685[chr1:153481478]
Enhancers that have rs200011685[chr1:153481478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200011685[chr1:153481478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153481466 153481487 IRF1 JASPAR yes 32254628
chr1 153481467 153481482 FOXP1 JASPAR yes 32254629
chr1 153481467 153481488 IRF1 JASPAR yes 32254630
chr1 153481471 153481492 IRF1 JASPAR yes 32254631
chr1 153481472 153481487 FOXP1 JASPAR yes 32254632
chr1 153481472 153481493 IRF1 JASPAR yes 32254633
chr1 153481476 153481491 STAT2 JASPAR yes 32254634
chr1 153481476 153481497 IRF1 JASPAR yes 32254635
chr1 153481477 153481492 FOXP1 JASPAR yes 32254636
chr1 153481477 153481498 IRF1 JASPAR yes 32254637
chr1 153481478 153481499 IRF1 JASPAR yes 32254638
Genes associated with rs200011685[chr1:153481478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More