EnhancerDB
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  3. rs200027164[chr17:60894233]
Enhancers that have rs200027164[chr17:60894233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60893841 60907875 enh17280
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs200027164[chr17:60894233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60894225 60894243 NR3C1 JASPAR yes 55214348
chr17 60894231 60894235 YY1 TRANSFAC yes 55214349
chr17 60894232 60894252 RREB1 JASPAR yes 55214350
chr17 60894232 60894253 IRF1 JASPAR yes 55214351
chr17 60894233 60894239 TCF4 TRANSFAC yes 55214352
chr17 60894233 60894248 FOXP1 JASPAR yes 55214353
chr17 60894233 60894254 IRF1 JASPAR yes 55214354
Genes associated with rs200027164[chr17:60894233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More