EnhancerDB
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  3. rs200044802[chr1:185616142]
Enhancers that have rs200044802[chr1:185616142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs200044802[chr1:185616142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185615841 185616326 ZNF143 GTRD no Epithelial (MCF-7) 21359470
chr1 185615841 185616326 ZNF143 GTRD no Epithelial (MCF-7) 107852580
chr1 185616131 185616146 MEF2C JASPAR yes 33830214
chr1 185616131 185616152 IRF1 JASPAR yes 33830215
chr1 185616132 185616147 MEF2A JASPAR yes 33830216
chr1 185616134 185616148 IRF7 JASPAR yes 33830217
chr1 185616135 185616150 FOXP1 JASPAR yes 33830218
chr1 185616136 185616157 IRF1 JASPAR yes 33830219
chr1 185616137 185616152 FOXP1 JASPAR yes 33830220
chr1 185616141 185616147 TBP TRANSFAC yes 33830221
Genes associated with rs200044802[chr1:185616142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More