EnhancerDB
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  3. rs200050474[chr1:8980238]
Enhancers that have rs200050474[chr1:8980238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs200050474[chr1:8980238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8980232 8980253 IRF1 JASPAR yes 26609243
chr1 8980234 8980249 PRDM1 JASPAR yes 26609244
chr1 8980234 8980249 STAT2 JASPAR yes 26609245
chr1 8980237 8980252 FOXP1 JASPAR yes 26609246
chr1 8980237 8980258 IRF1 JASPAR yes 26609247
chr1 8980238 8980253 FOXP1 JASPAR yes 26609248
Genes associated with rs200050474[chr1:8980238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More