EnhancerDB
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  3. rs200073728[chr18:57554621]
Enhancers that have rs200073728[chr18:57554621]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57537325 57555285 enh17763
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs200073728[chr18:57554621]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57554616 57554631 FOXP1 JASPAR yes 111061799
chr18 57554617 57554638 IRF1 JASPAR yes 111061800
chr18 57554618 57554638 RREB1 JASPAR yes 111061801
chr18 57554619 57554630 FOXP2 JASPAR yes 111061802
chr18 57554621 57554633 IRF1 JASPAR yes 111061803
chr18 57554621 57554636 STAT2 JASPAR yes 111061804
Genes associated with rs200073728[chr18:57554621], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More