EnhancerDB
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  3. rs200082414[chr5:179185389]
Enhancers that have rs200082414[chr5:179185389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179185005 179195695 enh8908
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Blood (T-cell) Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Breast Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs200082414[chr5:179185389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179185372 179185393 IRF1 JASPAR yes 68187844
chr5 179185376 179185397 IRF1 JASPAR yes 68187845
chr5 179185377 179185392 FOXP1 JASPAR yes 68187846
chr5 179185377 179185398 IRF1 JASPAR yes 68187847
chr5 179185378 179185393 FOXP1 JASPAR yes 68187848
chr5 179185378 179185399 IRF1 JASPAR yes 68187849
chr5 179185382 179185396 IRF7 JASPAR yes 68187850
chr5 179185382 179185403 IRF1 JASPAR yes 68187851
chr5 179185383 179185398 FOXP1 JASPAR yes 68187852
chr5 179185383 179185404 IRF1 JASPAR yes 68187853
chr5 179185384 179185405 IRF1 JASPAR yes 68187854
chr5 179185388 179185409 IRF1 JASPAR yes 68187855
chr5 179185389 179185404 FOXP1 JASPAR yes 68187856
chr5 179185389 179185410 IRF1 JASPAR yes 68187857
Genes associated with rs200082414[chr5:179185389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More