EnhancerDB
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  3. rs200116698[chr17:62196735]
Enhancers that have rs200116698[chr17:62196735]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62177725 62201515 enh17291
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs200116698[chr17:62196735]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62196714 62196735 IRF1 JASPAR yes 55280228
chr17 62196730 62196751 IRF1 JASPAR yes 55280233
chr17 62196731 62196752 IRF1 JASPAR yes 55280234
chr17 62196732 62196747 STAT2 JASPAR yes 55280235
chr17 62196733 62196754 IRF1 JASPAR yes 55280236
chr17 62196734 62196755 IRF1 JASPAR yes 55280237
chr17 62196735 62196750 FOXP1 JASPAR yes 55280238
chr17 62196735 62196756 IRF1 JASPAR yes 55280239
Genes associated with rs200116698[chr17:62196735], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More