EnhancerDB
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  3. rs200162289[chr1:94215149]
Enhancers that have rs200162289[chr1:94215149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs200162289[chr1:94215149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94215140 94215155 FOXP1 JASPAR yes 30831268
chr1 94215141 94215156 FOXP1 JASPAR yes 30831269
chr1 94215141 94215162 IRF1 JASPAR yes 30831270
chr1 94215142 94215157 FOXP1 JASPAR yes 30831271
chr1 94215142 94215163 IRF1 JASPAR yes 30831272
chr1 94215143 94215158 FOXP1 JASPAR yes 30831273
chr1 94215143 94215164 IRF1 JASPAR yes 30831274
chr1 94215144 94215159 FOXP1 JASPAR yes 30831275
chr1 94215144 94215165 IRF1 JASPAR yes 30831276
chr1 94215145 94215160 FOXP1 JASPAR yes 30831277
chr1 94215145 94215166 IRF1 JASPAR yes 30831278
chr1 94215146 94215161 FOXP1 JASPAR yes 30831279
chr1 94215148 94215163 FOXP1 JASPAR yes 30831280
chr1 94215149 94215170 IRF1 JASPAR yes 30831281
Genes associated with rs200162289[chr1:94215149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More