EnhancerDB
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  3. rs200169229[chr6:107989905]
Enhancers that have rs200169229[chr6:107989905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107984585 108002855 enh9300
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs200169229[chr6:107989905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107989895 107989915 RREB1 JASPAR yes 104128273
chr6 107989898 107989912 PLAG1 JASPAR yes 104128274
chr6 107989899 107989919 RREB1 JASPAR yes 104128275
chr6 107989900 107989910 SP1 JASPAR yes 104128276
chr6 107989900 107989910 SP1 TRANSFAC yes 104128277
chr6 107989901 107989911 SP1 JASPAR yes 104128278
chr6 107989902 107989912 ZNF740 JASPAR yes 104128279
chr6 107989903 107989919 GLIS1 JASPAR yes 104128280
chr6 107989904 107989914 SP1 JASPAR yes 104128281
chr6 107989904 107989914 ZNF740 JASPAR yes 104128282
chr6 107989904 107989918 GLIS2 JASPAR yes 104128283
chr6 107989904 107989918 GLIS3 JASPAR yes 104128284
Genes associated with rs200169229[chr6:107989905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More