EnhancerDB
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  3. rs200204495[chr15:40369938]
Enhancers that have rs200204495[chr15:40369938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200204495[chr15:40369938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40369270 40370431 TCF7L2 GTRD no Colon (HCT116) 21650069
chr15 40369436 40370175 TCF7L2 GTRD no Colon (HCT116) 21650070
chr15 40369445 40370529 ZNF274 GTRD no Blood (GM12878) 21650071
chr15 40369658 40370321 TCF7L2 GTRD no Colon (HCT116) 21650072
chr15 40369927 40369947 RREB1 JASPAR yes 22927365
chr15 40369932 40369944 FOXC2 JASPAR yes 22927367
chr15 40369933 40369954 IRF1 JASPAR yes 22927368
chr15 40369934 40369949 FOXP1 JASPAR yes 22927369
chr15 40369934 40369955 IRF1 JASPAR yes 22927370
chr15 40369935 40369956 IRF1 JASPAR yes 22927371
chr15 40369936 40369951 FOXP1 JASPAR yes 22927372
chr15 40369936 40369957 IRF1 JASPAR yes 22927373
chr15 40369937 40369958 IRF1 JASPAR yes 22927374
chr15 40369938 40369953 FOXP1 JASPAR yes 22927375
chr15 40369938 40369959 IRF1 JASPAR yes 22927376
Genes associated with rs200204495[chr15:40369938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More