EnhancerDB
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  3. rs200217399[chr6:25360140]
Enhancers that have rs200217399[chr6:25360140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25357285 25373535 enh38931
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs200217399[chr6:25360140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25360125 25360143 SRF JASPAR yes 100851020
chr6 25360131 25360145 SPIC JASPAR yes 100851022
chr6 25360133 25360154 IRF1 JASPAR yes 100851023
chr6 25360134 25360149 FOXP1 JASPAR yes 100851024
chr6 25360136 25360141 ETS2 TRANSFAC yes 100851025
chr6 25360137 25360152 STAT2 JASPAR yes 100851026
Genes associated with rs200217399[chr6:25360140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More