EnhancerDB
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  3. rs200239428[chr15:39472625]
Enhancers that have rs200239428[chr15:39472625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39472205 39509375 enh16053
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs200239428[chr15:39472625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39472623 39472638 FOXP1 JASPAR yes 22860497
chr15 39472624 39472630 TBP TRANSFAC yes 22860498
chr15 39472624 39472639 FOXP1 JASPAR yes 22860499
chr15 39472625 39472640 FOXP1 JASPAR yes 22860500
chr15 39472625 39472646 IRF1 JASPAR yes 22860501
Genes associated with rs200239428[chr15:39472625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More