EnhancerDB
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  3. rs200241229[chr12:52677254]
Enhancers that have rs200241229[chr12:52677254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs200241229[chr12:52677254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52677249 52677270 IRF1 JASPAR yes 120934706
chr12 52677251 52677272 IRF1 JASPAR yes 120934707
chr12 52677252 52677256 YY1 TRANSFAC yes 120934708
chr12 52677252 52677267 FOXP1 JASPAR yes 120934709
chr12 52677252 52677273 IRF1 JASPAR yes 120934710
chr12 52677253 52677268 FOXP1 JASPAR yes 120934711
chr12 52677253 52677274 IRF1 JASPAR yes 120934712
chr12 52677254 52677269 FOXP1 JASPAR yes 120934713
chr12 52677254 52677275 IRF1 JASPAR yes 120934714
Genes associated with rs200241229[chr12:52677254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More