EnhancerDB
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  3. rs200269826[chr1:45195994]
Enhancers that have rs200269826[chr1:45195994]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45192844 45199975 enh313
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs200269826[chr1:45195994]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45195973 45195994 IRF1 JASPAR yes 28578122
chr1 45195986 45196007 IRF1 JASPAR yes 28578126
chr1 45195991 45196012 IRF1 JASPAR yes 28578127
chr1 45195992 45196013 IRF1 JASPAR yes 28578128
chr1 45195993 45196008 FOXP1 JASPAR yes 28578129
chr1 45195993 45196014 IRF1 JASPAR yes 28578130
Genes associated with rs200269826[chr1:45195994], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More