EnhancerDB
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  3. rs200281282[chr12:52548677]
Enhancers that have rs200281282[chr12:52548677]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs200281282[chr12:52548677]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52547500 52548954 ZNF143 GTRD no Epithelial (MCF-7) 21546515
chr12 52548666 52548681 MEF2A JASPAR yes 120922957
chr12 52548667 52548682 MEF2C JASPAR yes 120922958
chr12 52548668 52548680 MEF2A JASPAR yes 120922959
chr12 52548668 52548680 MEF2B JASPAR yes 120922960
chr12 52548668 52548680 MEF2D JASPAR yes 120922961
Genes associated with rs200281282[chr12:52548677], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More