EnhancerDB
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  3. rs200299536[chr6:42245562]
Enhancers that have rs200299536[chr6:42245562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42241485 42251615 enh49102
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Bone (Osteoblast) Lung Lung (A549) Stomach Uterus Thymus Heart
Transcript factors that have rs200299536[chr6:42245562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42245555 42245570 MEF2C JASPAR yes 101703287
chr6 42245556 42245571 MEF2A JASPAR yes 101703288
chr6 42245557 42245569 MEF2A JASPAR yes 101703289
chr6 42245557 42245569 MEF2D JASPAR yes 101703290
chr6 42245559 42245573 FOXF2 JASPAR yes 101703291
chr6 42245559 42245573 ONECUT3 JASPAR yes 101703292
chr6 42245559 42245574 FOXP1 JASPAR yes 101703293
chr6 42245560 42245571 FOXA1 JASPAR yes 101703294
chr6 42245560 42245575 FOXA1 JASPAR yes 101703295
chr6 42245561 42245572 FOXB1 JASPAR yes 101703296
chr6 42245561 42245572 FOXC1 JASPAR yes 101703297
chr6 42245561 42245573 FOXC2 JASPAR yes 101703298
chr6 42245562 42245574 FOXI1 JASPAR yes 101703299
Genes associated with rs200299536[chr6:42245562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More