EnhancerDB
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  3. rs200299861[chr5:95665202]
Enhancers that have rs200299861[chr5:95665202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 95646225 95678295 enh38145
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs200299861[chr5:95665202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 95665186 95665202 SOX8 JASPAR yes 64438485
chr5 95665195 95665208 NFKB1 JASPAR yes 64438486
chr5 95665195 95665208 NFKB2 JASPAR yes 64438487
chr5 95665196 95665207 NFKB1 JASPAR yes 64438488
chr5 95665197 95665207 RELA JASPAR yes 64438489
chr5 95665201 95665211 MZF1 JASPAR yes 64438490
Genes associated with rs200299861[chr5:95665202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 94987885 95034415 - SPATA9 ENSG00000145757.11 95034415 630787 Spleen 0.35561 5540