EnhancerDB
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  3. rs200308718[chr2:38930057]
Enhancers that have rs200308718[chr2:38930057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs200308718[chr2:38930057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38930049 38930064 FOXA1 JASPAR yes 73167154
chr2 38930049 38930064 MEF2A JASPAR yes 73167155
chr2 38930050 38930065 FOXP1 JASPAR yes 73167156
chr2 38930051 38930063 FOXC2 JASPAR yes 73167157
chr2 38930051 38930063 MEF2A JASPAR yes 73167158
chr2 38930051 38930063 MEF2B JASPAR yes 73167159
chr2 38930051 38930063 MEF2D JASPAR yes 73167160
chr2 38930052 38930062 MEF2A JASPAR yes 73167161
chr2 38930052 38930063 FOXB1 JASPAR yes 73167162
chr2 38930052 38930063 FOXC1 JASPAR yes 73167163
chr2 38930053 38930057 YY1 TRANSFAC yes 73167164
chr2 38930055 38930067 MEF2A JASPAR yes 73167165
chr2 38930056 38930066 MEF2A JASPAR yes 73167166
chr2 38930057 38930065 FOXL1 JASPAR yes 73167167
chr2 38930057 38930068 FOXB1 JASPAR yes 73167168
Genes associated with rs200308718[chr2:38930057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More