EnhancerDB
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  3. rs200348069[chr17:75386428]
Enhancers that have rs200348069[chr17:75386428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200348069[chr17:75386428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75386206 75386895 ZNF274 GTRD no Bone Marrow (K562) 21790338
chr17 75386206 75386895 ZNF274 GTRD no Bone Marrow (K562) 108298620
chr17 75386293 75386946 ZBTB33 GTRD no Brain (SK-N-SH) 21790339
chr17 75386293 75386946 ZBTB33 GTRD no Brain (SK-N-SH) 108298621
chr17 75386296 75386956 ZBTB33 GTRD no Brain (SK-N-SH) 21790340
chr17 75386296 75386956 ZBTB33 GTRD no Brain (SK-N-SH) 108298622
chr17 75386425 75386440 FOXP1 JASPAR yes 56076089
chr17 75386426 75386441 FOXP1 JASPAR yes 56076090
chr17 75386427 75386433 TBP TRANSFAC yes 56076091
chr17 75386427 75386442 FOXP1 JASPAR yes 56076092
chr17 75386427 75386448 IRF1 JASPAR yes 56076093
chr17 75386428 75386443 FOXP1 JASPAR yes 56076094
chr17 75386428 75386449 IRF1 JASPAR yes 56076095
Genes associated with rs200348069[chr17:75386428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More