EnhancerDB
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  3. rs200349151[chr1:178610012]
Enhancers that have rs200349151[chr1:178610012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs200349151[chr1:178610012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178610006 178610027 IRF1 JASPAR yes 33431904
chr1 178610007 178610028 IRF1 JASPAR yes 33431905
chr1 178610008 178610029 IRF1 JASPAR yes 33431906
chr1 178610009 178610024 FOXP1 JASPAR yes 33431907
chr1 178610009 178610030 IRF1 JASPAR yes 33431908
chr1 178610010 178610031 IRF1 JASPAR yes 33431909
chr1 178610011 178610026 FOXP1 JASPAR yes 33431910
chr1 178610011 178610032 IRF1 JASPAR yes 33431911
chr1 178610012 178610027 FOXP1 JASPAR yes 33431912
Genes associated with rs200349151[chr1:178610012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More