EnhancerDB
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  3. rs200354274[chr17:41532117]
Enhancers that have rs200354274[chr17:41532117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs200354274[chr17:41532117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41532111 41532122 TFAP2A JASPAR yes 54348857
chr17 41532111 41532122 TFAP2B JASPAR yes 54348858
chr17 41532111 41532122 TFAP2C JASPAR yes 54348859
chr17 41532112 41532121 TFAP2A JASPAR yes 54348860
Genes associated with rs200354274[chr17:41532117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More