EnhancerDB
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  3. rs200355988[chr15:56192266]
Enhancers that have rs200355988[chr15:56192266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 56184185 56192498 enh16152
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs200355988[chr15:56192266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 56192260 56192281 IRF1 JASPAR yes 23514568
chr15 56192262 56192277 PRDM1 JASPAR yes 23514569
chr15 56192262 56192277 STAT2 JASPAR yes 23514570
chr15 56192265 56192280 FOXP1 JASPAR yes 23514571
chr15 56192266 56192281 FOXP1 JASPAR yes 23514572
Genes associated with rs200355988[chr15:56192266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More