EnhancerDB
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  3. rs200396954[chr3:185823178]
Enhancers that have rs200396954[chr3:185823178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185808545 185825535 enh7742
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs200396954[chr3:185823178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185823176 185823186 HOXD13 JASPAR yes 8312958
chr3 185823176 185823187 HOXA10 JASPAR yes 8312959
Genes associated with rs200396954[chr3:185823178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More