EnhancerDB
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  3. rs200408971[chr15:45925324]
Enhancers that have rs200408971[chr15:45925324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 45921685 45943627 enh16095
Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs200408971[chr15:45925324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 45925317 45925327 ALX3 JASPAR yes 23142693
chr15 45925317 45925327 GSX2 JASPAR yes 23142694
chr15 45925317 45925327 MIXL1 JASPAR yes 23142695
chr15 45925318 45925326 ISX JASPAR yes 23142696
chr15 45925318 45925326 LHX9 JASPAR yes 23142697
chr15 45925318 45925326 LMX1B JASPAR yes 23142698
chr15 45925318 45925326 PRRX1 JASPAR yes 23142699
chr15 45925318 45925326 RAX2 JASPAR yes 23142700
chr15 45925318 45925326 SHOX JASPAR yes 23142701
chr15 45925318 45925326 UNCX JASPAR yes 23142702
chr15 45925319 45925334 FOXP1 JASPAR yes 23142703
chr15 45925321 45925336 FOXP1 JASPAR yes 23142704
chr15 45925322 45925337 FOXP1 JASPAR yes 23142705
chr15 45925322 45925343 IRF1 JASPAR yes 23142706
chr15 45925323 45925329 TBP TRANSFAC yes 23142707
chr15 45925323 45925338 FOXP1 JASPAR yes 23142708
Genes associated with rs200408971[chr15:45925324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More