EnhancerDB
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  3. rs200455230[chr1:178907221]
Enhancers that have rs200455230[chr1:178907221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs200455230[chr1:178907221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178907214 178907235 IRF1 JASPAR yes 33454983
chr1 178907215 178907230 FOXP1 JASPAR yes 33454984
chr1 178907215 178907236 IRF1 JASPAR yes 33454985
chr1 178907219 178907240 IRF1 JASPAR yes 33454986
chr1 178907220 178907235 FOXP1 JASPAR yes 33454987
chr1 178907220 178907241 IRF1 JASPAR yes 33454988
Genes associated with rs200455230[chr1:178907221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More