EnhancerDB
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  3. rs200467870[chr17:56453736]
Enhancers that have rs200467870[chr17:56453736]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56450725 56479661 enh4499
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2)
Transcript factors that have rs200467870[chr17:56453736]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56453730 56453736 TBP TRANSFAC yes 55014938
chr17 56453731 56453743 FOXC2 JASPAR yes 55014939
chr17 56453733 56453747 ONECUT2 JASPAR yes 55014940
chr17 56453733 56453747 ONECUT3 JASPAR yes 55014941
chr17 56453733 56453748 FOXP1 JASPAR yes 55014942
chr17 56453734 56453749 FOXA1 JASPAR yes 55014943
chr17 56453735 56453746 FOXB1 JASPAR yes 55014944
chr17 56453735 56453746 FOXC1 JASPAR yes 55014945
chr17 56453735 56453747 FOXC2 JASPAR yes 55014946
chr17 56453736 56453748 FOXI1 JASPAR yes 55014947
Genes associated with rs200467870[chr17:56453736], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More